|
| Status |
Public on Oct 15, 2014 |
| Title |
Genome-wide maps of SNAI2 binding in undifferentiated and differentiated keratinocytes |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We report the ChIP-Seq results of SNAI2 in several different conditions which include: SNAI2 binding in both control and SNAI2 knockdown cells to demonstrate specificity of the binding. SNAI2 ChIP-Seq was also performed in SNAI2 or control LACZ overexpressing cells cultured in growth medium as well as LACZ or SNAI2 overexpressing cells in differentiation medium.
|
| |
|
| Overall design |
Examination of SNAI2 binding sites across the genome using the 6 different conditions
|
| |
|
| Contributor(s) |
Mistry D, Sen GL |
| Citation(s) |
25100569 |
| |
| Submission date |
Feb 27, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
George Sen |
| E-mail(s) |
gsen@ucsd.edu
|
| Organization name |
UCSD
|
| Department |
Dermatology/CMM
|
| Street address |
9500 GIlman Drive
|
| City |
La Jolla |
| State/province |
CA |
| ZIP/Postal code |
92093 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (18)
|
|
| Relations |
| BioProject |
PRJNA239547 |
| SRA |
SRP039013 |
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