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Series GSE55430 Query DataSets for GSE55430
Status Public on Feb 28, 2014
Title Effect of cortisol on S. Typhimurium parental strain and an isogenic scsA mutant
Platform organisms Salmonella enterica subsp. enterica serovar Typhimurium str. DT104; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Enteritidis; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91
Sample organism Salmonella enterica subsp. enterica serovar Typhimurium
Experiment type Expression profiling by array
Summary S. Typhimurium 112910a parental strain and an isogenic ΔscsA strain were grown to stationary phase in SPI2 inducing minimal medium (MM5.8 - Erikkson et al., 2006 Inf & Imm., 74:1243) with or without supplementation with 1µM cortisol
 
Overall design 4 samples (stat phase wt, stat phase wt + 1µM cortisol, stat phase ΔscsA, stat phase ΔscsA + 1µM cortisol) and 3 biological replicates for each sample.
 
Contributor(s) Verbrugghe E, Thompson A
Citation(s) 26857846
Submission date Feb 27, 2014
Last update date Jul 29, 2019
Contact name Arthur Thompson
E-mail(s) arthur.thompson@ifr.ac.uk
Phone 01603 255181
Organization name Institute of Food Research
Street address Colney Lane
City Norwich
ZIP/Postal code NR4 7UA
Country United Kingdom
 
Platforms (1)
GPL13609 SALSA 2 IFR Salmonella 8K Arrays
Samples (12)
GSM1336508 stat phase wt1 (minimal medium)
GSM1336509 stat phase wt2 (minimal medium)
GSM1336510 stat phase wt3 (minimal medium)
Relations
BioProject PRJNA239568

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE55430_RAW.tar 9.4 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table
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