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Series GSE55988 Query DataSets for GSE55988
Status Public on Mar 19, 2014
Title mRNA profile in DR-related mutants
Organism Caenorhabditis elegans
Experiment type Expression profiling by high throughput sequencing
Summary Dietary restriction (DR) extends lifespan in a wide variety of species, yet the underlying mechanisms are not well understood. Here we show that the Caenorhabditis elegans HNF4α-related nuclear hormone receptor NHR-62 is required for metabolic and physiologic responses associated with DR-induced longevity. nhr-62 mediates the longevity of eat-2 mutants, a genetic mimetic of dietary restriction, and blunts the longevity response of DR induced by bacterial food dilution at low nutrient levels. Metabolic changes associated with DR, including decreased Oil Red O staining, decreased triglyceride levels, and increased autophagy are partly reversed by mutation of nhr-62. Additionally, the DR fatty acid profile is altered in nhr-62mutants. Expression profiles reveal that several hundred genes induced by DR depend on the activity of NHR-62, including a putative lipase required for the DR response. This study provides critical evidence of nuclear hormone receptor regulation of the DR longevity response, suggesting hormonal and metabolic control of life span.
 
Overall design Young adult worms before bearing eggs inside were collected. N2 serves as the control of wild type. 3 biological replicates included in this experiment.
 
Contributor(s) Shen Y, Antebi A
Citation(s) 23935515
Submission date Mar 18, 2014
Last update date May 15, 2019
Contact name Corinna Klein
E-mail(s) cklein@age.mpg.de
Organization name Max Planck Institute for Biology of Ageing
Street address Joseph-Stelzmann-Straße 9b
City Köln
ZIP/Postal code 50931
Country Germany
 
Platforms (1)
GPL18245 Illumina HiSeq 2500 (Caenorhabditis elegans)
Samples (12)
GSM1349884 N2 rep1
GSM1349885 N2 rep2
GSM1349886 N2 rep3
Relations
BioProject PRJNA241944
SRA SRP040269

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Supplementary file Size Download File type/resource
GSE55988_htseq-count-table.txt.gz 526.0 Kb (ftp)(http) TXT
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Processed data are available on Series record

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