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Series GSE56523 Query DataSets for GSE56523
Status Public on Mar 31, 2017
Title Impact of exposure to environmentally-relevant concentrations of ionic silver and nanosilver on thyroid hormone-dependent postembryonic development of the North American bullfrog (Rana catesbeiana)
Platform organisms Xenopus laevis; Aquarana catesbeiana; Lithobates pipiens
Sample organism Aquarana catesbeiana
Experiment type Expression profiling by array
Summary Nanoparticles (<100 nm) are engineered to have unique physico-chemical properties compared to their larger counterparts. Nanosilver (nAg) is the most prevalent nanoparticle in consumer products due to its strong antimicrobial action. While nAg toxicity at high concentrations has been well described, the potential for sublethal effects at or below regulatory guidelines is relatively unknown. Amphibian metamorphosis is mediated by thyroid hormone (TH) and can be precociously induced by the addition of exogenous hormone. Low concentrations of nAg have been shown to disrupt TH-dependent responses in cultured premetamorphic Rana catesbeiana tadpole tail fin. The present study examined the effects of exposure to an environmentally relevant concentration (6 µg/L) of either nAg or ionic silver (iAg) on premetamorphic tadpoles in the absence and presence of exogenous TH. Disruption of thyroid hormone-mediated signalling in brain and liver transcriptomes was evaluated using the MAGEX cDNA microarray.
 
Overall design Six premetamorphic tadpoles were randomly selected from each treatment condition (n=12) and the status of brain and liver transcriptomes determined by MAGEX cDNA array analysis.
 
Contributor(s) Veldhoen N, Helbing CC
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Submission date Apr 04, 2014
Last update date Apr 01, 2017
Contact name Nik Veldhoen
E-mail(s) veldhoen@uvic.ca
Phone 250-721-7086
Organization name University of Victoria
Department Biochemistry & Microbiology
Lab Helbing
Street address PO Box 3055 STN CSC
City Victoria
State/province BC
ZIP/Postal code V8W 3P6
Country Canada
 
Platforms (1)
GPL16276 University of Victoria/Caren Helbing Laboratory Frog MAGEX DNA array version 2008
Samples (72)
GSM1363235 Liver_NaOH_rep1
GSM1363236 Liver_NaOH_rep2
GSM1363237 Liver_NaOH_rep3
Relations
BioProject PRJNA243638

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE56523_RAW.tar 13.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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