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| Status |
Public on Apr 15, 2014 |
| Title |
RNA-Seq characterization of human H1-derived NPC differentiation timecourse |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
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| Summary |
High resolution transcriptional profiling of H1-derived human neuronal precursor cells over a timecourse of differentiation in vitro.
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| Overall design |
Human NPC differentiation timecourse covers Days 0,1,2,4,5,11, and 18 after induction of neuronal differentiation as described in manuscript. Each time point was assayed in triplicate cultures with the exception of Day 5, in which one outlier culture has been removed.
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| Contributor(s) |
Goff LA, Sauvageau M, Lodato S, Bonev B, Groff AF, Gerhardinger C, Swerdel M, D'Ecclessis M, Moore JC, Kellis M, Hart RP, Arlotta P, Rinn JL |
| Citation(s) |
24381249 |
| Submission date |
Apr 14, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Loyal A Goff |
| E-mail(s) |
loyalgoff@jhmi.edu
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| Organization name |
Johns Hopkins University
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| Department |
Institute of Genetic Medicine
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| Lab |
Goff
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| Street address |
733 N. Broadway Avenue
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| City |
Baltimore |
| State/province |
MD |
| ZIP/Postal code |
21205 |
| Country |
USA |
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| Platforms (2) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
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| Samples (20)
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| Relations |
| BioProject |
PRJNA244582 |
| SRA |
SRP041159 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE56785_Full_FPKM_matrix.tab.gz |
921.4 Kb |
(ftp)(http) |
TAB |
| GSE56785_Full_diff_table.tab.gz |
16.3 Mb |
(ftp)(http) |
TAB |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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