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Series GSE57991 Query DataSets for GSE57991
Status Public on Dec 31, 2016
Title miRNAs involed in lactation of cow mammary gland
Organism Bos taurus
Experiment type Non-coding RNA profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary We investigated miRNA expression in Holstein dairy cow of mammary gland with different producing quality milk using high-throughput sequence and qRT-PCR techniques. miRNA libraries were constructed from mammary gland tissues taken from a high producing quality milk and a low producing quality milk Holstein dairy cow, the small RNA digitalization analysis based on HiSeq high-throughput sequencing takes the SBS-sequencing by synthesis.The libraries included 4732 miRNAs. A total of 124 miRNAs in the high producing quality milk mammary gland showed significant differences in expression compared to low producing quality milk mammary gland (P<0.05).
Conclusion: Our study provides a broad view of the bovine mammary gland small RNA expression profile characteristics. Differences in types and expression levels of miRNAs were observed between high producing quality milk and a low producing quality milk Holstein dairy cow
 
Overall design Examination of 3 group of different producing quality milk mammary gland of Holstein dairy cow,each group has 3 sample
 
Contributor(s) Wang C, Wang J, Li D, Li Q
Citation(s) 24987964
Submission date May 27, 2014
Last update date Aug 01, 2019
Contact name Chunmei wang
E-mail(s) wangcm-1@163.com
Phone 08613936507139
Organization name Northeast Agricultural University
Street address 59 MuCai Street
City Haerbin
ZIP/Postal code 150030
Country China
 
Platforms (1)
GPL15749 Illumina HiSeq 2000 (Bos taurus)
Samples (3)
GSM1399272 RH1A
GSM1399273 RL1A
GSM1399274 RP1A
Relations
BioProject PRJNA248657
SRA SRP042291

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE57991_RH1A_processed_data.tar.gz 4.1 Mb (ftp)(http) TAR
GSE57991_RL1A_processed_data.tar.gz 4.3 Mb (ftp)(http) TAR
GSE57991_RP1A_processed_data.tar.gz 5.6 Mb (ftp)(http) TAR
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Raw data are available in SRA
Processed data are available on Series record

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