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Series GSE58968 Query DataSets for GSE58968
Status Public on Jul 31, 2014
Title Gene expression microarray of HT1080 cell line
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Analysis of the effects of genomic elements, gene transcritpion, and DNA replication on gene targeting. The hypothesis tested was that genomic elements and processes either positively or megatively influence AAV-mediated gene targeting. Results show that homologous recombination increases when the target site is transcribed in the opposite orientation of an incoming replication or transcription fork.
 
Overall design Total RNA obtained from cultured HT1080 cell lines
 
Contributor(s) Deyle DR, Russell DW
Citation(s) 25282150
Submission date Jul 01, 2014
Last update date Feb 18, 2019
Contact name David W. Russell
E-mail(s) drussell@u.washington.edu
Organization name University of Washington
Department Medicine
Street address 1959 NE Pacific St
City Seattle
State/province WA
ZIP/Postal code 98195
Country USA
 
Platforms (1)
GPL6884 Illumina HumanWG-6 v3.0 expression beadchip
Samples (3)
GSM1423157 HT1080-1
GSM1423158 HT1080-2
GSM1423159 HT1080-3
Relations
BioProject PRJNA254024

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE58968_RAW.tar 6.3 Mb (http)(custom) TAR
GSE58968_non-normalized.txt.gz 731.0 Kb (ftp)(http) TXT
Processed data included within Sample table

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