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| Status |
Public on Sep 04, 2014 |
| Title |
Insights into the epigenomic landscape of the human malaria vector Anopheles gambiae |
| Organism |
Anopheles gambiae |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
We characterize the epigenome of the human malaria vector Anopheles gambiae in midgut cells by mapping the distribution and levels of two post-translational histone modifications, H3K27ac and H3K27me3. These histone profiles were then correlated with levels of gene expression obtained by RNA-seq.
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| Overall design |
ChIP-seq and RNA-seq were performed on adult female A. gambiae midguts. RNA-seq was performed on adult female A. gambiae salivary glands.
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| Contributor(s) |
Gómez-Díaz E, Rivero A, Chandre F, Corces VG |
| Citation(s) |
25177345 |
| Submission date |
Jul 25, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Elena Gómez-Díaz |
| E-mail(s) |
elegomezdiaz@gmail.com
|
| Organization name |
Spanish National Research Council (CSIC)
|
| Department |
Institute of Parasitology and Biomedicine Lopez-Neyra (IPBLN)
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| Lab |
Gómez-Díaz Lab
|
| Street address |
Avda. del Conocimiento, 17
|
| City |
Armilla |
| State/province |
Granada |
| ZIP/Postal code |
18100 |
| Country |
Spain |
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| Platforms (1) |
| GPL17644 |
Illumina HiSeq 2000 (Anopheles gambiae) |
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| Samples (5)
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| Relations |
| BioProject |
PRJNA256184 |
| SRA |
SRP044861 |
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