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Series GSE60219 Query DataSets for GSE60219
Status Public on Sep 30, 2018
Title Transcriptional landscape of different brain regions in a Rett syndrome mouse model
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We propose to investigate differential gene expression in Hippocampus and Frontal cortex of MeCP2 knock-out to gain more resolution on transcriptomic changes that occur in the Rett syndrome mouse model
 
Overall design Sequencing of RNA from Hippocampus and Frontal Cortex pool samples of MeCP2 knock-out and wild-type mice
 
Contributor(s) Petazzi P, Esteller M
Citation(s) 36674969
Submission date Aug 08, 2014
Last update date Feb 07, 2023
Contact name Manel Esteller
Organization name IDIBELL
Department PEBC
Lab Cancer Epigenetics
Street address Hospital Duran i Reynals Av. Gran Via s/n km, 2.7
City L'Hospitalet de Llobregat
State/province Barcelona
ZIP/Postal code 08908
Country Spain
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (8)
GSM1467851 HIP_wt1
GSM1467852 HIP_wt2
GSM1467853 HIP_KO1
Relations
BioProject PRJNA257779
SRA SRP045354

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60219_countsFC_KO1_KO2_wt1_wt2.bed.gz 882.5 Kb (ftp)(http) BED
GSE60219_countsHIP_KO1_KO2_wt1_wt2.bed.gz 887.9 Kb (ftp)(http) BED
SRA Run SelectorHelp
Processed data are available on Series record
Raw data are available in SRA

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