|
| Status |
Public on Aug 18, 2014 |
| Title |
RNA-seq transcriptional profiling of peripheral blood leukocytes from cattle infected with Mycobacterium bovis |
| Organism |
Bos taurus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
In the present study, we have analyzed the peripheral blood leukocyte (PBL) transcriptome of eight natural M. bovis-infected and eight age- and sex-matched non-infected control Holstein-Friesian animals using RNA-seq. In addition, we compared gene expression profiles generated using RNA-seq with those previously generated using the high-density Affymetrix® GeneChip® Bovine Genome Array platform from the same PBL-extracted RNA
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| |
|
| Overall design |
Identify changes occuring at the transcriptome level of PBL in response to M. bovis
|
| |
|
| Contributor(s) |
McLoughlin KE, Nalpas NC, Rue-Albrecht K, Browne JA, Magee DA, Killick KE, Park SE, Hokamp K, Meade KG, O'Farrelly C, Gormley E, Gordon SV, MacHugh DE |
| Citation(s) |
25206354 |
| |
| Submission date |
Aug 08, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
David E MacHugh |
| E-mail(s) |
david.machugh@ucd.ie
|
| Phone |
+353-1-7166256
|
| Organization name |
University College Dublin
|
| Department |
College of Agriculture, Food Science and Veterinary Medicine
|
| Lab |
Animal Genomics Laboratory
|
| Street address |
University College Dublin, Belfield
|
| City |
Dublin |
| ZIP/Postal code |
D4 |
| Country |
Ireland |
| |
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| Platforms (1) |
| GPL15750 |
Illumina Genome Analyzer IIx (Bos taurus) |
|
| Samples (16)
|
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| Relations |
| BioProject |
PRJNA257841 |
| SRA |
SRP045380 |
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