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Series GSE60362 Query DataSets for GSE60362
Status Public on Jan 08, 2019
Title TL1A signaling enhances the differentiation of TH9 cells and TH9-driven mucosal pathologies via BATF and BATF3 signaling pathways
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The TNF family member TL1A (TNFSF15) co-stimulates several T helper subsets and promotes T cell-dependent models of inflammatory diseases, including inflammatory bowel diseases (IBD) and allergic lung disease. TL1A polymorphisms confer susceptibility to IBD and have been associated with disease severity. In this study, we identified TL1A as a strong inducer of TH9 cell differentiation in vitro. Mechanistically, TL1A induced NF-B signaling and down-stream STAT6 activation and facilitated cooperative binding of BATF, BATF3, and IRF4 to the Il9 promoter. In vivo, utilizing an adoptive T cell transfer model we demonstrated that TL1A promoted IL-9-dependent, TH9 cell-induced intestinal and lung inflammation and blocking anti-IL-9 antibodies attenuated TL1A-driven mucosal inflammation. Our results demonstrate that TL1A promotes TH9 cell differentiation and function and define a role for IL-9 in TL1A-induced mucosal inflammation.
 
Overall design 4 samples (2x2)
 
Contributor(s) Tsuda M, Tang J, Funari V, Michelsen KS
Citation(s) 30617301
Submission date Aug 12, 2014
Last update date May 15, 2019
Contact name Jie Tang
E-mail(s) jie.tang@cshs.org
Organization name Cedars Sinai Medical Center
Street address 8700 Beverly Blvd
City Los Angeles
ZIP/Postal code 90048
Country USA
 
Platforms (1)
GPL18635 Ion Torrent Proton (Mus musculus)
Samples (4)
GSM1477261 Th9 rep1
GSM1477262 Th9 rep2
GSM1477263 Th9+TLA1 rep1
Relations
BioProject PRJNA258093
SRA SRP045448

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60362_RAW.tar 450.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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