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Series GSE60475 Query DataSets for GSE60475
Status Public on Apr 04, 2016
Title Gene body methylation patterns in Daphnia are associated with gene family size
Organisms Daphnia pulex; Daphnia magna
Experiment type Methylation profiling by high throughput sequencing
Summary We report the characterized gene body methylation patterns in two Daphnia species.
 
Overall design Examination of cytosine methylation in DNA samples of 2 Daphnia species following bi-sulfite treatment.
 
Contributor(s) Asselman J, De Coninck DI, Pfrender ME, De Schamphelaere KA
Citation(s) 27017526
Submission date Aug 18, 2014
Last update date May 15, 2019
Contact name Jana Asselman
E-mail(s) jana.asselman@ugent.be
Phone +32 9 264 37 64
Organization name Ghent University
Lab Laboratory of Environmental Toxicology and Aquatic Ecology
Street address Coupure Links 653 (Building F, 2nd floor)
City Gent
ZIP/Postal code 9000
Country Belgium
 
Platforms (2)
GPL19087 Illumina HiSeq 2000 (Daphnia pulex)
GPL21075 Illumina HiSeq 2000 (Daphnia magna)
Samples (6)
GSM1480724 Dpu_bisulfite_rep1
GSM1480725 Dpu_bisulfite_rep2
GSM1480726 Dpu_bisulfite_rep3
Relations
BioProject PRJNA258376
SRA SRP045564

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60475_RAW.tar 1.1 Gb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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