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Series GSE61143 Query DataSets for GSE61143
Status Public on Oct 01, 2014
Title C. albicans biofilm development
Organism Candida albicans
Experiment type Expression profiling by array
Summary Transcriptional profiling of C. albicans in biofilms after 90 min of adherence or 8 h, 24 h, or 48 h of development; compared to C. albicans in suspension cultures grown to log at 30 deg or 37 deg or grown to stationary phase at 30 deg or collected from the unadhered cells in the biofilm assay.
 
Overall design At least 2 biological replicates for each condition. All experiments are multiple condition: C. albicans in particular growth condition vs. mixed reference of all conditions in that experiment.
 
Contributor(s) Fox EP
Citation(s) 25784162
Submission date Sep 05, 2014
Last update date Apr 01, 2015
Contact name Emily Patricia Fox
E-mail(s) emily.fox@ucsf.edu
Phone 415-476-8097
Organization name University of California, San Francisco
Department Biochemistry and Biophysics
Lab Alexander D. Johnson
Street address 600 16th Street, GH - N374
City San Francisco
State/province CA
ZIP/Postal code 94143-2200
Country USA
 
Platforms (1)
GPL13830 Agilent-020166 Ca21_GE_plus_tiling_2.0 [ORF-centered version]
Samples (29)
GSM1498340 Stationary planktonic vs Mixed Reference 1
GSM1498341 Log phase 30degrees vs Mixed Reference 1
GSM1498342 Adhered biofilm cells vs Mixed Reference 1
Relations
BioProject PRJNA260347

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE61143_RAW.tar 365.7 Mb (http)(custom) TAR (of GPR, TIFF, TXT)
GSE61143_timecoursematrix_precollapse.txt.gz 981.2 Kb (ftp)(http) TXT
GSE61143_timecoursemtarix_collapsed.txt.gz 633.1 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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