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Series GSE61358 Query DataSets for GSE61358
Status Public on Sep 12, 2014
Title Gene expression data from human induced pluripotent stem cells, induced pluripotent stem cell-derived human neural stem/progenitor cells, and iPSC-derived cerebral cortical neurons
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Embryonic stem cells are pluripotent and possess the ability to differentiate into numerous lineages during the developmental process. In similarity to embryonic stem cells, human induced pluripotent stem cells (iPSCs) possess the potential to differentiate into multiple lineages making them an excellent research tool. We generated iPSCs from multiple donors and also differentiated iPSCs from these donors into human neural stem/progenitor cells (NSCs). We used human transcriptome arrays to detail the programme of gene expression underlying NPC induction and identified distinct classes of up-regulated genes during this process.

Human induced pluripotent stem cells (iPSCs) can be used to create neurons in vitro. This microarray allows researchers to check the expression of their gene of interest in iPSC-derived neurons and compare the gene expression profile of iPSC-derived neurons to other cell types or primary human tissue.
 
Overall design Total RNAs were extracted from human induced pluripotent stem cells and induced pluripotent stem cell-derived neural stem cells. Their gene expression profiles were investigated using the Affymetrix GeneChip Human Transcriptome Array 2.0 platform.

Total RNA was extracted from iPSC-derived cerebral cortical neurons and the gene expression profile was investigated using the Affymetrix GeneChip Human Transcriptome Array 2.0
Web link http://www.axolbio.com
 
Contributor(s) Wei J, Shi Y, Cox CL
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Sep 11, 2014
Last update date Oct 29, 2018
Contact name Yichen Shi
E-mail(s) support@axolbio.com
Organization name Axol Bioscience Limited
Street address Suite 3, The Science Village Building, Chesterford Research Park, Little Chesterford
City Cambridgeshire
ZIP/Postal code CB10 1XL
Country United Kingdom
 
Platforms (1)
GPL17586 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
Samples (7)
GSM1502840 human iPSC line 3
GSM1502841 human iPSC line 4
GSM1502842 human iPSC line 6
Relations
BioProject PRJNA260838

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE61358_Normalized_data_with_annotation.txt.gz 5.8 Mb (ftp)(http) TXT
GSE61358_RAW.tar 168.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
Processed data are available on Series record

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