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Series GSE61438 Query DataSets for GSE61438
Status Public on Sep 16, 2014
Title Comparative microRNA profiling of sporadic and BRCA1 associated basal-like breast cancers
Organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary Analysis of miRNA expression in grade 3 luminal, sporadic and BRCA1 associated basal-like breast cancers
 
Overall design 44 primary grade III breast cancer (11 BRCA1 basal, 16 sporadic basal, 17 luminal) and 13 normal breast FFPE (formalin fixed, paraffin embedded) specimens, plus 7 controls and 5 cell lines were analysed. The aim of the study was to derive grade-specific miRNA signatures for sporadic and BRCA1 basal-like breast cancers, and to ascertain an immunohistochemical profile regulated by BRCA1 specific miRNAs for potential diagnostic uses.
 
Contributor(s) Yan M
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Submission date Sep 15, 2014
Last update date Feb 18, 2019
Contact name Max Yan
E-mail(s) max.yan@sesiahs.health.nsw.gov.au
Phone 61 2 9382 9042
Organization name SEALS
Department Anatomical Pathology
Street address Prince of Wales Hospital
City Randwick
State/province NSW
ZIP/Postal code 2031
Country Australia
 
Platforms (1)
GPL8179 Illumina Human v2 MicroRNA expression beadchip
Samples (69)
GSM1504435 Control 1 a
GSM1504436 B1
GSM1504437 L1
Relations
BioProject PRJNA261072

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE61438_RAW.tar 70.0 Kb (http)(custom) TAR
GSE61438_non-normalized.txt.gz 281.1 Kb (ftp)(http) TXT
Processed data are available on Series record

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