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Series GSE6158 Query DataSets for GSE6158
Status Public on Jan 22, 2007
Title Investigating the links between organic acid and carbohydrate regulation of gene expression.
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary Arabidopsis acetate non-utilizing mutants were isolated based on fluoroacetate resistant germination. Interestingly, a number of these mutants exhibited altered developmental characteristics in response to exogenous sucrose supply, such as bleaching of the cotyledons. A preliminary microarray experiment has already been conducted on one of the mutants, acn1-2. The gene expression analysis was done using 3 day-old seedlings of acn1-2 and the parent, Col-7, which were germinated on agar plates with and without exogenous sucrose. A cross-comparison of acn1-2 and Col-7 revealed that the expression of a number of carbohydrate responsive genes was altered in the mutant. The request for further microarray analysis is to confirm this result.
Keywords: gene_knock_out
 
Overall design Number of plants pooled:3 x 1000 seedlings
 
Contributor(s) Greville K
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Oct 27, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) affy@arabidopsis.info
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (12)
GSM142687 MH001_ATH1_A1-grevi-CC1
GSM142688 MH001_ATH1_A2-grevi-CC2
GSM142689 MH001_ATH1_A3-grevi-CC3
Relations
Affiliated with GSE69995
BioProject PRJNA100563

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE6158_RAW.tar 28.4 Mb (http)(custom) TAR (of CEL)

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