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| Status |
Public on Jun 30, 2015 |
| Title |
Gene expression changes induced in Rice (Oryza sativa) leaves by lipopolysaccharide (LPS) extracted from Xanthomonas oryzae pv. oryzae (Xoo) strain BXO43 |
| Organism |
Oryza sativa |
| Experiment type |
Expression profiling by array
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| Summary |
Lipopolysaccharide is a Microbe Associated Molecular Pattern (MAMP) that is known to induce defense responses in plants. We have shown that treatment of rice leaves with Xoo LPS induces callose deposition, reactive oxygen production and enhances resistance against subsequent infection by the pathogen.
We have performed transcriptional profiling of rice leaves that are treated with Xoo LPS to identify differentially expressed genes.
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| Overall design |
Xoo LPS was injected into mid-veins of rice leaves and RNA was isolated 15 hours later.
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| Contributor(s) |
Girija AM, Sonti R |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Sep 29, 2014 |
| Last update date |
Dec 27, 2017 |
| Contact name |
Ramesh V. Sonti |
| E-mail(s) |
sonti@ccmb.res.in
|
| Organization name |
Centre for cellular and molecular biology (CCMB)
|
| Department |
Plant Microbe Interactions
|
| Street address |
Uppal Road
|
| City |
Hyderabad |
| State/province |
Andhra Pradesh |
| ZIP/Postal code |
500007 |
| Country |
India |
| |
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| Platforms (1) |
| GPL2025 |
[Rice] Affymetrix Rice Genome Array |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA262508 |
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