|
Status |
Public on May 03, 2015 |
Title |
A cross-comparison of technologies for the detection of microRNAs from FFPE samples of hepatoblastoma patients [sequencing] |
Organism |
Homo sapiens |
Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
Summary |
This work highlights similarities and differences between three platforms (next-generation sequencing, microarray and NanoString) for detecting miRNAs and compares their strengths and weaknesses.
|
|
|
Overall design |
miRNA expression profiles were determined in 6 Hepatoblastoma FFPE samples using a next-generation sequencing platform.
|
|
|
Contributor(s) |
Chatterjee A, Leichter AL, Fan V, Tsai P, Purcell RV, Sullivan MJ, Eccles MR |
Citation(s) |
26039282, 26613016 |
|
Submission date |
Oct 02, 2014 |
Last update date |
May 15, 2019 |
Contact name |
Aniruddha Chatterjee |
E-mail(s) |
aniruddha.chatterjee@otago.ac.nz
|
Phone |
+64-210701558
|
Organization name |
University of Otago
|
Department |
Pathology
|
Lab |
Epigenetics and Disease
|
Street address |
270 Great king Street
|
City |
Dunedin |
State/province |
Otago |
ZIP/Postal code |
9054 |
Country |
New Zealand |
|
|
Platforms (1) |
|
Samples (6)
|
|
This SubSeries is part of SuperSeries: |
GSE62018 |
A cross-comparison of technologies for the detection of microRNAs from FFPE samples of hepatoblastoma patients |
|
Relations |
BioProject |
PRJNA262945 |
SRA |
SRP048606 |