NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE62259 Query DataSets for GSE62259
Status Public on Oct 01, 2015
Title MicroRNA profiling of the developing mammary gland identifies miR-184 as a candidate breast tumour suppressor gene (Affymetrix)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The study of mammalian development has offered many insights into the molecular aetiology of cancer. We previously used analysis of mammary morphogenesis to discover a critical role for GATA-3 in mammary developmental and carcinogenesis. In recent years an important role for MicroRNAs (miRNAs) in a myriad of cellular processes in development and in oncogenesis has emerged. In this study, microRNA profiling of stromal and epithelial cellular subsets microdissected from the developing mouse mammary gland revealed many microRNAs with expression restricted to various cellular subsets. MicroRNA-184 (miR-184) was exclusively expressed in epithelial cells and markedly upregulated during differentiation of the proliferative, invasive cells of the pubertal terminal end bud (TEB) into ductal epithelial cells in vivo and in FACS-sorted mammary stem cells (MaSCs) versus luminal epithelial cells. miR-184 expression was silenced in mouse tumour models compared to non-transformed epithelium and in a majority of breast cancer cell line models. Ectopic reactivation of miR-184 inhibited the proliferation and self-renewal of metastatic triple negative breast cancer (TNBC) cell lines in vitro and delayed tumour formation and reduced metastasis in vivo. Gene expression studies uncovered multi-factorial direct regulation of genes in the AKT/mTORC1 pathway by miR-184. In clinical breast cancer tissues, expression of miR-184 is lost in primary TNBCs while the miR-184 promoter is methylated in a subset of lymph node metastases from TNBC patients. These studies elucidated a new layer of regulation in the PI3K/AKT/mTOR pathway with relevance to mammary development and tumour proliferation and metastasis.
 
Overall design Gene expression analysis of MDA-MB-231 cells 48 hours after transfection with mir-184 mimics with negative control comparisons
 
Contributor(s) Phua Y, Nguyen A, Roden DL, Elsworth B, Nikolic I, Yang J, Mcfarland A, Russell R, Cowley M, Kaplan W, Nair R, Zotenko E, Tan S, Caldas C, Clark S, Kouros-Mehr H, Swarbrick A
Citation(s) 26070602
Submission date Oct 10, 2014
Last update date Jul 26, 2018
Contact name Daniel Roden
E-mail(s) d.roden@garvan.org.au
Organization name Garvan Institute
Street address 384 Victoria Street
City Sydney
State/province NSW
ZIP/Postal code 2010
Country Australia
 
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (8)
GSM1524191 MDAMB231-negative_control-rep1
GSM1524192 MDAMB231-negative_control-rep2
GSM1524193 MDAMB231-negative_control-rep3
This SubSeries is part of SuperSeries:
GSE62261 MicroRNA profiling of the developing mammary gland identifies miR-184 as a candidate breast tumour suppressor gene
Relations
BioProject PRJNA263603

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE62259_RAW.tar 32.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap