|
| Status |
Public on Oct 16, 2014 |
| Title |
Transcriptome Analysis of KSHV during de novo primary infection of human CD14+ cells |
| Organism |
Human gammaherpesvirus 8 |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The objective of this study was to identify the viral transcripts packaged into the virion particles and the transcription profiles of the viral genome during early infection, till the virus establishes latent infection in B-cells as well as in endothelial cells
|
| |
|
| Overall design |
Samples from each time points were analyzed and the experiments were done in duplicate.
|
| |
|
| Contributor(s) |
Verma SC, Purushothaman P |
| Citation(s) |
25552714 |
| |
| Submission date |
Oct 15, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Subhash C Verma |
| E-mail(s) |
scverma@medicine.nevada.edu
|
| Phone |
775-682-6743
|
| Organization name |
University of Nevada, Reno
|
| Department |
Microbiology and Immunology
|
| Lab |
Verma Lab
|
| Street address |
1664 N Virginia Street, MS 320
|
| City |
Reno |
| State/province |
NV |
| ZIP/Postal code |
89557 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL17680 |
Illumina HiSeq 2000 (Human herpesvirus 8) |
|
| Samples (5)
|
| GSM1525537 |
KSHV Transcriptome at 4hpi in CD14+ cells |
| GSM1525538 |
KSHV Transcriptome at 24hpi in CD14+ cells |
| GSM1525539 |
KSHV Transcriptome at 48hpi in CD14+ cells |
| GSM1525540 |
KSHV Transcriptome at 72hpi in CD14+ cells |
| GSM1525541 |
KSHV Transcriptome at 96hpi in CD14+ cells |
|
| This SubSeries is part of SuperSeries: |
| GSE62344 |
Transcriptome Analysis of KSHV during de novo primary infection of human B-and endothelial-cells |
|
| Relations |
| BioProject |
PRJNA263879 |
| SRA |
SRP048931 |
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