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Series GSE62364 Query DataSets for GSE62364
Status Public on Oct 16, 2014
Title Identification of a subtelomeric gene family expressed during the asexual-sexual stage transition in Plasmodium falciparum
Organism Plasmodium falciparum
Experiment type Expression profiling by array
Summary For malaria transmission, the parasite must undergo sexual differentiation into mature gametocytes. However, the molecular basis for this critical transition in the parasites life cycle is unknown. Six previously uncharacterized genes, Pfg14.744, Pfg14.745, Pfg14.748, Pfg14.763, Pfg14.752 and Pfg6.6 that are members of a 36 gene Plasmodium falciparum-specific subtelomeric superfamily were found to be expressed in parasites that are committed to sexual development as suggested by co-expression of Pfs16 and Pfg27. Northern blots demonstrated that Pfg14.744 and Pfg14.748 were first expressed before the parasites differentiated into morphologically distinct gametocytes, transcription continued to increase until stage II gametocytes were formed and then rapidly decreased. Immunofluorescence assays indicated that both proteins were only produced in the subpopulation of ring stage parasites that are committed to gametocytogenesis and both localized to the parasitophorous vacuole (PV)b of the early ring stage parasites. As the parasites continued to develop Pfg14.748 remained within the parasitophorous vacuole, while Pfg14.744 was detected in the erythrocyte. The 5' flanking region of either gene alone was sufficient to drive early gametocyte specific expression of green fluorescent protein (GFP). In parasites transfected with a plasmid containing the Pfg14.748 5' flanking region immediately upstream of GFP, fluorescence was observed in a small number of schizonts the cycle before stage I gametocytes were observed. This expression pattern is consistent with commitment to sexual differentiation prior to merozoite release and erythrocyte invasion. Further investigation into the role of these genes in the transition from asexual to sexual differentiation could provide new strategies to block malaria transmission.
 
Overall design Microarray analysis was used to compare two clones derived from Plasmodium falciparum strain 3D7 parasites that differ in their ability to undergo gametocytogenesis. Clone G+ produces gametocytes and clone G- produces very few if any gametocytes. RNA was harvested from the cultures when the asexual parasitemia was 0.9-1.48% (day 4) (n=4) after setting up the gametocyte cultures and 5.2-5.58% (day 6) (n=4) prior to the appearance of morphologically distinct gametocytes and used to generate cDNA that was labeled with Cy3 or Cy5 and hybridized to the Plasmodium falciparum 70 mer oligonucleotide microarray developed by DeRisi and co-workers.
 
Citation(s) 15996767, 23093935
Submission date Oct 15, 2014
Last update date Oct 16, 2014
Contact name Tetsuya Furuya
E-mail(s) furuyat@cc.tuat.ac.jp
Organization name Tokyo University of Agriculture and Technology
Department Veterinary Medicine
Lab Veterinary Microbiology
Street address 3-5-8 Saiwai-cho
City Fuchu
State/province Tokyo
ZIP/Postal code 183-8509
Country Japan
 
Platforms (1)
GPL1858 NIAID Pfab
Samples (8)
GSM1525790 G+ G- Day 4 - repeat 1 - mAdbID:55571
GSM1525791 G+ G- Day 4 - repeat 2 - mAdbID:55572
GSM1525792 G+ G- Day 4 - repeat 3 - mAdbID:55573
Relations
BioProject PRJNA263917

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE62364_RAW.tar 9.3 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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