NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE62500 Query DataSets for GSE62500
Status Public on Oct 21, 2014
Title PRC2 loss amplifies Ras-driven transcription and confers sensitivity to BRD4-based therapies [expression array]
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The polycomb repressive complex 2 (PRC2) exerts oncogenic effects in many tumour types1. However, loss-of-function mutations in PRC2 components occur in a subset of haematopoietic malignancies, sug- gesting that this complex plays a dichotomous and poorly understood role in cancer2,3. Here we provide genomic, cellular, and mouse mod- elling data demonstrating that the polycomb group gene SUZ12 func- tions as tumour suppressor in PNS tumours, high-grade gliomas and melanomas by cooperating with mutations in NF1. NF1 encodes a Ras GTPase-activating protein (RasGAP) and its loss drives cancer by activating Ras4. We show that SUZ12 loss potentiates the effects of NF1 mutations by amplifying Ras-driven transcription through effects on chromatin. Importantly, however, SUZ12 inactivation also triggers an epigenetic switch that sensitizes these cancers to bromodomain inhib- itors. Collectively, these studies not only reveal an unexpected con- nection between the PRC2 complex, NF1 and Ras, but also identify a promising epigenetic-based therapeutic strategy that may be exploited for a variety of cancers.
 
Overall design 9 samples in triplicates, 3x LacZ control, 3x SUZ12 over expression, 3x JQ1 treatment
 
Contributor(s) De Raedt T, Cichowski K
Citation(s) 25119042
Submission date Oct 20, 2014
Last update date Jul 26, 2018
Contact name Thomas De Raedt
E-mail(s) tderaedt@rics.bwh.harvard.edu
Organization name Harvard Medical School - Brigham Women's Hospital
Department Medicine
Lab Cichowski Lab
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (9)
GSM1275853 90-8TL_LACZ_veh_1
GSM1275854 90-8TL_LACZ_veh_2
GSM1275855 90-8TL_LACZ_veh_3
This SubSeries is part of SuperSeries:
GSE52777 PRC2 loss amplifies Ras-driven transcription and confers sensitivity to BRD4-based therapies
Relations
BioProject PRJNA264622

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE62500_RAW.tar 36.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap