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Series GSE63203 Query DataSets for GSE63203
Status Public on Jun 01, 2016
Title A restricted period for formation of Outer Subventricular Zone defined by Cdh1 and Trnp1 levels
Organism Mustela putorius furo
Experiment type Expression profiling by array
Summary The Outer Subventricular Zone (OSVZ) is a germinal layer playing key roles in the development of the neocortex, with particular relevance in gyrencephalic species like human and ferret where it contains abundant basal Radial Glia Cells (bRGCs) that promote cortical expansion. Here we identify a brief period in ferret embryonic development when apical RGCs generate a burst of bRGCs that become founders of the OSVZ. After this period, bRGCs in the OSVZ proliferate and self-renew exclusively locally, thereby forming a self-sustained lineage independent from the other germinal layers. The time window for the brief period of OSVZ bRGC production is delineated by the coincident down-regulation of Cdh1 and Trnp1, and their up-regulation reduces bRGC production and prevents OSVZ seeding. This mechanism in cortical development may have key relevance in brain evolution and disease
 
Overall design Samples were analyzed with 3 replicates of each of them (except E34SVZ that has 2 replicantes). Comparisons were done taking different reference sample depending on the comparison.
 
Contributor(s) Martínez-Martínez MA, De Juan Romero C, Fernández V, Cárdenas A, Götz M, Borrell V
Citation(s) 27264089, 35172154
Submission date Nov 12, 2014
Last update date Mar 09, 2022
Contact name Victor Borrell
E-mail(s) vborrell@umh.es
Organization name CSIC
Department Institute of Neuroscience
Lab 221
Street address Av Ramon y Cajal s/n
City San Juan de Alicante
State/province Alicante
ZIP/Postal code 03550
Country Spain
 
Platforms (1)
GPL19111 Agilent-036832 Ferret_44K_v3
Samples (11)
GSM1543800 E30VZ replicate 1
GSM1543801 E30VZ replicate 2
GSM1543802 E30VZ replicate 3
Relations
BioProject PRJNA266982

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE63203_RAW.tar 70.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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