|
| Status |
Public on Nov 23, 2014 |
| Title |
RNA-seq analysis of the eight Drosophila SR protein family members |
| Organism |
Drosophila melanogaster |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Using RNA-seq, we characterize the global AS regulation of the eight Drosophila SR protein family members
|
| |
|
| Overall design |
RNA-seq experiments on two replicate samples from 8 individual SR protein knockdown (exptGroup=S), two replicates of simultaneous SR protein knockdown (XL6:B52 & SC35:B52) (exptGroup=D). Each exptGroup includes duplicate of its own non-specific (NS) controls.
|
| |
|
| Contributor(s) |
Bradley T, Cook ME, Blanchette M |
| Citation(s) |
25414008 |
| |
| Submission date |
Nov 13, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Malcolm Cook |
| E-mail(s) |
mec@stowers.org, malcolm.cook@gmail.com
|
| Organization name |
Stowers Institute For Medical Research
|
| Department |
Big Data AI
|
| Street address |
1000 E 50th Street
|
| City |
Kansas City |
| State/province |
MO |
| ZIP/Postal code |
64110 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13304 |
Illumina HiSeq 2000 (Drosophila melanogaster) |
|
| Samples (12)
|
|
| This SubSeries is part of SuperSeries: |
| GSE63261 |
SR proteins control a complex network of RNA-processing events |
|
| Relations |
| BioProject |
PRJNA268196 |
| SRA |
SRP050137 |
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