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Series GSE63350 Query DataSets for GSE63350
Status Public on Apr 16, 2015
Title The N-terminal Tail of CENP-A Confers Epigenetic Stability to Centromeres via the CENP-T Branch of the CCAN in Fission Yeast
Organism Schizosaccharomyces pombe
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We employ the well-studied fission yeast centromere to investigate the function of the CENP-A (Cnp1) N-tail. We show that alteration of the N-tail did not affect Cnp1 loading at centromeres, outer kinetochore formation, or spindle checkpoint signaling, but nevertheless elevated chromosome loss. N-Tail mutants exhibited synthetic lethality with an altered centromeric DNA sequence, with rare survivors harboring chromosomal fusions in which the altered centromere was epigenetically inactivated. Elevated centromere inactivation was also observed for N-tail mutants with unaltered centromeric DNA sequences. N-tail mutants specifically reduced localization of the CCAN proteins Cnp20/CENP-T and Mis6/CENP-I, but not Cnp3/CENP-C. Overexpression of Cnp20/CENP-T suppressed defects in an N-tail mutant, suggesting a causal link between reduced CENP-T recruitment and the observed centromere inactivation phenotype. Thus, the Cnp1 N-tail promotes epigenetic stability of centromeres via recruitment of the CENP-T branch of the CCAN.
 
Overall design Genome-wide localization of GFP-tagged N-tail Cnp1 variant tailswap versus wt control in cnp1 deletion background
 
Contributor(s) Folco HD, Espinoza CA, Desai AB
Citation(s) 25619765
Submission date Nov 17, 2014
Last update date May 15, 2019
Contact name Arshad Desai
E-mail(s) abdesai@ucsd.edu
Organization name UCSD/LICR
Department Cellular & Molecular Medicine
Lab Desai laboratory
Street address 9500 Gilman Dr
City La Jolla
State/province CA
ZIP/Postal code 92093
Country USA
 
Platforms (1)
GPL9854 Illumina Genome Analyzer (Schizosaccharomyces pombe)
Samples (4)
GSM1546499 GFP-Cnp1
GSM1546500 GFP-Tailswap
GSM1546501 GFP-Cnp1 input
Relations
BioProject PRJNA267552
SRA SRP049949

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Supplementary file Size Download File type/resource
GSE63350_RAW.tar 93.7 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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