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Series GSE63613 Query DataSets for GSE63613
Status Public on Feb 09, 2017
Title Antennae transcriptomics of Varroa-hygienic and Nurse/Forager bees
Organism Apis mellifera
Experiment type Expression profiling by high throughput sequencing
Summary The Varroa mite represents the main threat of honey bees (Apis mellifera). Bees from some colonies can limit the proliferation of this parasite by detecting and removing parasitized brood, such behavior is defined as Varroa sensitive Hygiene (VSH). This is an important issue for selecting colonies that can survive Varroa outbreaks. We therefore study the molecular meachnisms underlying this behavior by comparing the antennae transcriptomic profile of VSH and non-VSH bees. Those profiles were further compared to to the profiles of nurses and forager profiles involved in brood care and food collection, respectively.
 
Overall design mRNA profiling of bees performing or not Varroa hygienic behavior (4 replicates) and nurse and forager bees (2-3 replicates)
 
Contributor(s) Mondet F, Alaux C, Severac D, Rohmer M, Mercer A, Le Conte Y
Citation(s) 26000641
Submission date Nov 25, 2014
Last update date May 15, 2019
Contact name Cedric Alaux
E-mail(s) cedric.alaux@paca.inra.fr
Organization name INRA
Street address Domaine Saint Paul, Site Agroparc
City Avignon
ZIP/Postal code 84914
Country France
 
Platforms (1)
GPL19174 Illumina HiSeq 2500 (Apis mellifera)
Samples (13)
GSM1553554 VSH1
GSM1553555 VSH2
GSM1553556 VSH3
Relations
BioProject PRJNA268450
SRA SRP050250

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE63613_Pseudo_Counts_FOR-NUR_RLE_RNA-Seq_Alaux.xls.gz 1016.2 Kb (ftp)(http) XLS
GSE63613_Pseudo_Counts_VSH-NVS_RLE_RNA-Seq_Alaux.xls.gz 1.4 Mb (ftp)(http) XLS
SRA Run SelectorHelp
Processed data are available on Series record
Raw data are available in SRA

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