NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE63957 Query DataSets for GSE63957
Status Public on Jun 16, 2015
Title TRPM7 maintains mesenchymal phenotype of breast cancer cells by tensional regulation of SOX4 (SOX4 shRNA)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Analysis of the effect of shRNA-mediated knockdown of SOX4 on global gene expression levels in MDA-MB-231 human breast cancer cells.
Results were used for the identification of overlapping up- and downregulated genes in TRPM7 + SOX4 shRNA MDA-MB-231 cells
 
Overall design Total RNA isolated from MDA-MB-231 breast cancer cells transduced with a scrambled shRNA (shCntrl) or SOX4 shRNA (shSOX4#1)
 
Contributor(s) Kuipers AJ, Middelbeek J, Poelmans G, Klarenbeek J, Jalink K, van Leeuwen FN
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Dec 08, 2014
Last update date Jan 28, 2016
Contact name Arthur J Kuipers
E-mail(s) arthur.kuipers@radboudumc.nl
Organization name Radboudumc
Street address PO Box 9101
City Nijmegen
ZIP/Postal code 6500 HB
Country Netherlands
 
Platforms (1)
GPL10904 Illumina HumanHT-12 V4.0 expression beadchip (gene symbol)
Samples (6)
GSM1561326 MDA-231_shCntrl_rep1.
GSM1561327 MDA-231_shCntrl_rep2.
GSM1561328 MDA-231_shCntrl_rep3.
This SubSeries is part of SuperSeries:
GSE63958 TRPM7 maintains mesenchymal phenotype of breast cancer cells by tensional regulation of SOX4
Relations
BioProject PRJNA269599

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE63957_fold-change.txt.gz 363.9 Kb (ftp)(http) TXT
GSE63957_non-normalized.txt.gz 2.0 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap