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Series GSE64264 Query DataSets for GSE64264
Status Public on Sep 23, 2015
Title Functional Retinal Pigment Epithelium-like Cells from Human Fibroblasts
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The retinal pigment epithelium (RPE) provides vital support to photoreceptor cells and its dysfunction is associated with the onset and progression of age-related macular degeneration (AMD). Surgical provision of RPE cells may ameliorate AMD and thus it would be valuable to develop sources of patient-matched RPE cells for this application of regenerative medicine. We describe here the generation of functional RPE-like cells from fibroblasts that represent an important step toward that goal. We identified candidate master transcriptional regulators of RPEs using a novel computational method and then used these regulators to guide exploration of the transcriptional regulatory circuitry of RPE cells and to reprogram human fibroblasts into RPE-like cells. The RPE-like cells share key features with RPEs derived from healthy individuals, including morphology, gene expression and function, and thus represent a step toward the goal of generating patient-matched RPE cells for treatment of macular degeneration.
 
Overall design Expression analysis was performed on induced retinal pigment epithelium-like cells.
 
Contributor(s) D'Alessio A, Fan ZP, Lee TI, Young RA
Citation(s) 26603904
Submission date Dec 16, 2014
Last update date Mar 25, 2019
Contact name Richard A Young
E-mail(s) young_computation@wi.mit.edu
Phone 617-258-5219
Organization name Whitehead Institute for Biomedical Research
Lab Young Lab
Street address 9 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (2)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
GPL16043 GeneChip® PrimeView™ Human Gene Expression Array (with External spike-in RNAs)
Samples (20)
GSM1567461 iRPE_42
GSM1567462 iRPE_46
GSM1568154 RPE_shControl_1
Relations
BioProject PRJNA270548

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE64264_RAW.tar 51.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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