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Series GSE64383 Query DataSets for GSE64383
Status Public on Mar 11, 2015
Title Cell cycle-independent phospho-regulation of Fkh2 during hyphal growth regulates Candida albicans pathogenesis.
Organism Candida albicans
Experiment type Expression profiling by array
Summary The opportunistic human fungal pathogen, Candida albicans, undergoes morphological and transcriptional adaptation in the switch from commensalism to pathogenicity. Although previous gene-knockout studies have identified many factors involved in this transformation, it remains unclear how these factors are regulated to coordinate the switch. Investigating morphogenetic control by post-translational phosphorylation has generated important regulatory insights into this process, especially focusing on coordinated control by the cyclin-dependent kinase Cdc28. Here we have identified the Fkh2 transcription factor as a regulatory target of both Cdc28 and the cell wall biosynthesis kinase Cbk1, in a role distinct from its conserved function in cell cycle progression. Transcript profiling of Fkh2 deletion and non-phosphrylatable mutants in yeast and hypae revealed that the the hyphal-specific shift in the phosphorylation profile is required for the expression of genes involved in pathogenesis, host interaction and biofilm formation. We confirmed that these changes in gene expression resulted in corresponding defects in pathogenic processes
 
Overall design Two colour arrays comparing both non-phosphylatable Fkh2 and double deletion mutants to their respective wildtypes in both yeast and hyphal C. albicans.
 
Contributor(s) Sudbery IM, Greig JA, Richardson JP, Naglik J, Wang Y, Sudbery PE
Citation(s) 25617770
Submission date Dec 19, 2014
Last update date Mar 12, 2015
Contact name Ian Sudbery
E-mail(s) i.sudbery@sheffield.ac.uk
Organization name University of Sheffield
Department Molecular Biology and Biotechnology
Lab Sudbery Lab for Computational Genomics
Street address Firth Court, Western Bank
City Sheffield
ZIP/Postal code S11 8HG
Country United Kingdom
 
Platforms (1)
GPL19574 Candida albicans MI-CA-8.2k
Samples (10)
GSM1570027 Yeast Deletion Rep 1
GSM1570028 Hyphal Deletion Rep 1
GSM1570029 Yeast 6A mutant Rep 1
Relations
BioProject PRJNA270862

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE64383_Matrix_Table_Results.txt.gz 458.9 Kb (ftp)(http) TXT
GSE64383_RAW.tar 13.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data are available on Series record

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