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Series GSE65191 Query DataSets for GSE65191
Status Public on Dec 31, 2017
Title Nucleosome locations in human oral keratinocytes
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Miccrococcal nuclease sequencing (MNase-seq) of chromatin from control and Snail2-expressing oral keratinocytes
Overall design MNase-seq was performed on sub-confluent HN13(TVA) cells that stably expressed either Snail2-Cerulean (Snail2) or EYFP (Control). Two biological replicates of each were analyzed.
Contributor(s) Lyons JG, Delic NC
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Submission date Jan 22, 2015
Last update date May 15, 2019
Contact name Guy Lyons
Organization name University of Sydney
Department Dermatology
Street address Room W350 Blackburn Bldg D06
City Camperdown
State/province NSW
ZIP/Postal code 2006
Country Australia
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (4)
GSM1588960 MNase-seq_Control-1
GSM1588961 MNase-seq_Control-2
GSM1588962 MNase-seq_Snail2-1
BioProject PRJNA273377
SRA SRP052744

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Supplementary file Size Download File type/resource
GSE65191_Control.sorted.bai.gz 3.8 Mb (ftp)(http) BAI
GSE65191_Control.sorted.bam 9.9 Gb (ftp)(http) BAM
GSE65191_Snail2.sorted.bai.gz 3.5 Mb (ftp)(http) BAI
GSE65191_Snail2.sorted.bam 5.0 Gb (ftp)(http) BAM
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