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Series GSE65498 Query DataSets for GSE65498
Status Public on May 21, 2015
Title Purification and transcriptomic analysis of mouse fetal Leydig cells reveals candidate genes for disorders of sex development
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To examine the transcriptome of early testicular somatic cells during gonadogenesis at 12.5dpc RNA sequencing (RNA-Seq) was performed on murine primary testicular cell lineages isolated from the Sf1-eGFP line by FACS. The three main somatic cell lineages of the testis were isolated: the Sertoli cells which direct male development; the fetal Leydig cells (FLCs) that produce steroid hormones and virilise the XY individual and a heterogenous population of interstitial cells, some of which give rise to the adult Leydig cells (ALCs). This dataset provides a platform for exploring the biology of FLCs and understanding the role of these cells in testicular development and masculinization of the embryo, and a basis for targeted studies designed to identify causes of idiopathic XY DSD.
 
Overall design RNA-Seq of 3 enriched cell populations from 12.5dpc mouse gonad (Sertoli cells, Leydig cells and Interstitial cells isolated by FACS-sorting) on an Illumina HiSeq 1500, in triplicate.
 
Contributor(s) McClelland K, Larney C, Koopman P, Bowles J, Bell K, Oshlack A
Citation(s) 25855264
Submission date Feb 02, 2015
Last update date May 15, 2019
Contact name Katrina M Bell
E-mail(s) katrina.bell@mcri.edu.au
Phone 61399366709
Organization name MCRI
Street address RCH, Flemington Rd, Parkville
City Melbourne
State/province Victoria
ZIP/Postal code 3052
Country Australia
 
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (9)
GSM1598861 Sertoli repA
GSM1598862 Sertoli repB
GSM1598863 Sertoli repC
Relations
BioProject PRJNA274224
SRA SRP053038

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE65498_Interstitial_vs_Sertoli.txt.gz 170.9 Kb (ftp)(http) TXT
GSE65498_Leydig_vs_Interstitial.txt.gz 91.7 Kb (ftp)(http) TXT
GSE65498_Leydig_vs_Sertoli.txt.gz 95.3 Kb (ftp)(http) TXT
GSE65498_counts_per_Lane_per_Sample.txt.gz 1.1 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Processed data are available on Series record
Raw data are available in SRA

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