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| Status |
Public on Dec 21, 2006 |
| Title |
Analysis of expression of genes regulated by DAF-19 |
| Organism |
Caenorhabditis elegans |
| Experiment type |
Expression profiling by array
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| Summary |
By screening for genes possessing canonical X-box sequences in promoters of three Caenorhabditis species, namely C. elegans, C. briggsae and C. remanei, we identified 93 genes (including known X-box regulated genes) that encode putative components of ciliated neurons in C. elegans and are subject to the same regulatory control. For many of these genes, restricted anatomical expression in ciliated cells was confirmed, and control of transcription by the ciliogenic DAF-19 RFX transcription factor was demonstrated by comparative transcriptional profiling of daf-19(+) and daf-19(-) animals.
Keywords: Microarry analysis; DAF-19; X-box motif; C. elegans; transcription; comparative genomics
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| Overall design |
There 4 samples.
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| Contributor(s) |
Leroux MR, Moerman DG, Chen N, Blacque OE, Mah A, Chu J, Phgra K, Bakhoum MW, Newbury R, Khattra J, Wong K, Chan S, Go A, Efimenko E, Johnsen R, Phirke P, Swoboda P, Marra M, Stein L |
| Citation(s) |
17187676 |
| Submission date |
Dec 18, 2006 |
| Last update date |
Jul 06, 2016 |
| Contact name |
BCGSC BC Cancer Agency |
| E-mail(s) |
support@mouseatlas.org
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| Organization name |
Canada's Michael Smith Genome Sciences Centre
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| Department |
Gene Expression
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| Lab |
Marco Marra
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| Street address |
675 West 10th Avenue
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| City |
Vancouver |
| State/province |
BC |
| ZIP/Postal code |
V5Z 1L3 |
| Country |
Canada |
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| Platforms (1) |
| GPL200 |
[Celegans] Affymetrix C. elegans Genome Array |
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| Samples (4)
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| GSM151745 |
daf19(m86)_daf12(sa204) replicate 1 |
| GSM151746 |
daf19(m86)_daf12(sa204) replicate 2 |
| GSM151747 |
daf19(WT)_daf12(sa204) replicate 1 |
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| Relations |
| BioProject |
PRJNA98783 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE6563_RAW.tar |
6.4 Mb |
(http)(custom) |
TAR (of CEL) |
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