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Series GSE66105 Query DataSets for GSE66105
Status Public on Jun 30, 2015
Title ß-amylase1 mutant Arabidopsis plants show improved drought tolerance due to reduced starch breakdown in guard cells
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary In plants, drought stress is a major growth limiting factor causing cell water loss through open stomata. In this study, guard cell-specific transcripts from drought-stressed Arabidopsis plants were analyzed and a down-regulation of β-amylase 1 (BAM1) was found. In previous studies, BAM1 was shown to be involved in stomatal starch degradation under ambient conditions. Impaired starch breakdown of bam1 mutant plants was accompanied by decreased stomatal opening. Here, we show that drought tolerance of bam1 mutant plants is improved as compared to wild type controls. Microarray-analysis of stomata-specific transcripts from bam1 mutant plants revealed a significant down-regulation of genes encoding aquaporins, auxin- and ethylene-responsive factors and cell-wall modifying enzymes. This expression pattern suggests that reduced water-uptake and limited cell wall extension are associated with the closed state of stomata of bam1 mutant plants. Together these data suggest that regulation of stomata-specific starch turnover is important for adapting stomata opening to environmental needs and its breeding manipulation may result in drought tolerant crop plants.
 
Overall design Stress induced gene expression in Arabidopsis stomata was measured after exposure to single heat stress. Heat stress conditions were analyzed for both Col-0 plants and a T-DNA insertion line for β-amylase 1. Three days before harvesting heat stress was applied (32°C/28°C). Samples were taken by pooling the stomata of six to eight leaves per sample.
 
Contributor(s) Prasch C, Sonnewald U
Citation(s) 26139825
Submission date Feb 19, 2015
Last update date Aug 04, 2015
Contact name Christian Prasch
E-mail(s) cprasch@biologie.uni-erlangen.de
Organization name FAU Universität Erlangen-Nürnberg
Department Biochemistry division
Lab Uwe Sonnewald
Street address Staudtstrasse 5
City Erlangen
ZIP/Postal code 91058
Country Germany
 
Platforms (1)
GPL12621 Agilent-021169 Arabidopsis 4 Oligo Microarray (V4) (Probe Name version)
Samples (8)
GSM1614501 St Col-0 heat, replicate 1
GSM1614502 St bam1 con, replicate 1
GSM1614503 St bam1 heat, replicate 1
This SubSeries is part of SuperSeries:
GSE59321 ß-amylase1 mutant Arabidopsis plants show improved drought tolerance due to reduced starch breakdown in guard cells
Relations
BioProject PRJNA275891

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE66105_RAW.tar 17.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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