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Series GSE67544 Query DataSets for GSE67544
Status Public on Mar 31, 2016
Title Transcriptional response of Arabidopsis sweet11/sweet12 double mutants upon Colletotrichum higginsianum infection
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary In compatible interactions, biotrophic microbial phytopathogens rely on the supply of carbon and nitrogen assimilates by the colonized host tissue. Successful biotrophs need to reprogram host metabolism, which also involves the stimulation of assimilate export from living host cells into the plant-pathogen interface at the infection site. In rice and cassava, SWEET sucrose transporters, are induced by bacterial TAL (transcriptional activator-like) effectors to establish compatibility. A pathogen-specific transcriptional induction of SWEET transporters has also been observed in Arabidopsis leaves upon microbial challenge. Here, we have assessed the question, whether the phloem localized AtSWEET11 and AtSWEET12 transporters represent susceptibility factors in the interaction of Arabidopsis with the fungal hemibiotroph Colletotrichum higginsianum (Ch). Compared to wild type, sweet11/sweet12 double mutants exhibited priming of the SA pathway in mock conditions.
 
Overall design To investigate transcriptional changes in C. higgsinanum infected leaves, five-week old Arabidopsis plants were spray infected with 2 Mio. conidia/ ml 1h before lights off and fully expanded leaves of wild type Col-0 and the sweet11/sweet12 double mutant were harvested in three situations: 1) immediately before treatment, 2) from mock treated plants (sprayed with water) at 2.5 days post treatment and 3) from C. higginsianum inoculated leaves during biotrophic colonization at 2.5 days post treatment
 
Contributor(s) Gebauer P, Voll LM
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Submission date Apr 02, 2015
Last update date Apr 02, 2016
Contact name Lars Matthias Voll
E-mail(s) lars.voll@fau.de
Phone +49 (0)9131 8525238
Organization name Friedrich-Alexander-University Erlangen-Nuremberg
Department Division of Biochemistry
Street address Staudtstrasse 5
City Erlangen
ZIP/Postal code 91058
Country Germany
 
Platforms (1)
GPL12621 Agilent-021169 Arabidopsis 4 Oligo Microarray (V4) (Probe Name version)
Samples (17)
GSM1649215 ColInf0dpi1.txt:gProcessedSignal
GSM1649216 ColInf0dpi2.txt:gProcessedSignal
GSM1649217 ColInf2dpi1.txt:gProcessedSignal
Relations
BioProject PRJNA280219

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE67544_Normalized_data_with_annotation.txt.gz 4.4 Mb (ftp)(http) TXT
GSE67544_RAW.tar 110.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data are available on Series record

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