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| Status |
Public on Jul 15, 2015 |
| Title |
Integrative genomics identifies novel associations with APOL1 risk genotype in African American NEPTUNE subjects [glomerulus] |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
Glomerular expression data from human kidney biopsy in African American subjects with glomerulopathies
We used microarrays to analyze the transcriptome of African American subjects with glomerulopathies and the association of expression with APOL1 risk alleles (G1 and G2)
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| Overall design |
RNA from glomerular compartment was extracted and processed for hybridization on Affymetrix microarrays.
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| Contributor(s) |
Sampson M, Robertson C, Martini S, Mariani L, Lemley K, Gillies C, Otto E, Kopp J, Randolph A, Vega-Warner V, Eichinger F, Nair V, Gipson D, Cattran D, Johnstone D, O'Toole J, Bagnasco S, Song P, Barisoni L, Troost J, Kretzler M, Sedor J |
| Citation(s) |
26150607 |
| |
| Submission date |
Apr 21, 2015 |
| Last update date |
Dec 11, 2017 |
| Contact name |
Matthew Gordon Sampson |
| E-mail(s) |
mgsamps@med.umich.edu
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| Organization name |
University of Michigan School of Medicine
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| Department |
Pediatrics
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| Street address |
8220DMSRB3 1150 West Medical Center Drive
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| City |
Ann Arbor |
| State/province |
MI |
| ZIP/Postal code |
48109 |
| Country |
USA |
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| Platforms (1) |
| GPL17692 |
[HuGene-2_1-st] Affymetrix Human Gene 2.1 ST Array [transcript (gene) version] |
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| Samples (44)
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| This SubSeries is part of SuperSeries: |
| GSE68127 |
Integrative genomics identifies novel associations with APOL1 risk genotype in African American NEPTUNE subjects |
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| Relations |
| BioProject |
PRJNA282092 |
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