NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE68599 Query DataSets for GSE68599
Status Public on Nov 18, 2015
Title Trascriptional profile of BRAF inhibitor-resistant SKMEL28 and WM3248 melanoma cells and changes upon YAP/TAZ siRNA knockdown
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The activation of transcriptional coactivators YAP and its paralog TAZ has been shown to promote resistance to anti-cancer therapies. YAP/TAZ activity is tightly coupled to actin cytoskeleton architecture. However, the influence of actin remodeling on cancer drug resistance remains largely unexplored. Here, we report a pivotal role of actin remodeling in YAP/TAZ-dependent BRAF inhibitor resistance in BRAF V600E mutant melanoma cells. Melanoma cells resistant to BRAF inhibitor PLX4032 exhibit an increase in actin stress fiber formation, which appears to promote the nuclear accumulation of YAP/TAZ. Knockdown of YAP/TAZ overcomes PLX4032 resistance, whereas overexpression of constitutively active YAP induces resistance. Moreover, inhibition of actin polymerization and cytoskeletal tension in melanoma cells suppresses both YAP/TAZ activation and PLX4032 resistance. Our siRNA library screening identifies actin dynamics regulator TESK1 as a novel vulnerable point of the YAP/TAZ-dependent resistance pathway. These results suggest that inhibition of actin remodeling is a promising synthetic lethal strategy to suppress resistance in BRAF inhibitor therapies.
 
Overall design We compared expression profile of PLX4032 resistant SKMEL28 and WM3248 melanoma cells to parental cells (two biologic replicates each). We also compared expression profile changes from two biologic replicates of PLX4032-resistant SKMEL28 and WM3248 cells transfected with either control siRNA or YAP/TAZ siRNAs for 72 hrs
 
Contributor(s) Kim M, Kim J, Hong H, Lee S, Lee J, Jung E, Kim J
Citation(s) 26668268
Submission date May 06, 2015
Last update date Aug 13, 2018
Contact name Min Hwan Kim
E-mail(s) gemgoon3691@gmail.com
Phone 82-010-8285-3691
Organization name KAIST
Department Graduate School of Medical Science and Engineering
Lab Disease Functional Genomics Lab
Street address KAIST 291 Daehak-ro, Yuseong-gu
City Daejeon
ZIP/Postal code 305-338
Country South Korea
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (16)
GSM1898749 SKMEL28_Par_rep1
GSM1898750 SKMEL28_Par_rep2
GSM1898751 SKMEL28_Res_rep1
Relations
BioProject PRJNA283194

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE68599_GSM1898749-GSM1898764_non-normalized.txt.gz 4.6 Mb (ftp)(http) TXT
GSE68599_RAW.tar 59.5 Mb (http)(custom) TAR (of IDAT)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap