|
| Status |
Public on Jan 04, 2016 |
| Title |
Genome-wide mapping of Nup98HoxA9- and Crm1-binding sites in ES cell lines. |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We used ChIP-seq to examine the genome-wide binding of Nup98-HoxA9 and Crm1 in ES cells. Our analysis revealed that Nup98-HoxA9 is highly and preferentially targeted to specific chromatin sites, particularly near Hox cluster regions where the export factor Crm1 is originally prebound.
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| |
|
| Overall design |
chromatin immunoprecipitation
|
| |
|
| Contributor(s) |
Oka M, Yoneda Y, Maehara K, Hirata S, Ohkawa Y |
| Citation(s) |
26740045 |
| BioProject |
PRJDB3867 |
| |
| Submission date |
May 12, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Masahiro Oka |
| Organization name |
National Institutes of Biomedical Innovation, Health and Nutrition (NIBIOHN)
|
| Lab |
Laboratory of Nuclear Transport Dynamics
|
| Street address |
7-6-8 Saito-Asagi
|
| City |
Ibaraki |
| State/province |
Osaka |
| ZIP/Postal code |
567-0085 |
| Country |
Japan |
| |
|
| Platforms (1) |
| GPL18480 |
Illumina HiSeq 1500 (Mus musculus) |
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| Samples (10)
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