NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE68926 Query DataSets for GSE68926
Status Public on Feb 29, 2016
Title Identity, proliferation capacity, genomic stability and novel senescence markers of mesenchymal stem cells isolated from low volume of human bone marrow (I)
Organism Homo sapiens
Experiment type Expression profiling by RT-PCR
Summary Human bone marrow mesenchymal stem cells (hBM-MSCs) hold promise for treating diseases for which currently no therapeutic options exist. High quantities of MSCs are needed, requiring extensive cell expansion in long-term culture. However, the fundamental biological properties of MSCs can be altered by culture conditions. In this study, hBM-MSCs were isolated from residual human bone marrow (hBM) material and expanded to clinically relevant numbers at passage 3-4. The cells had normal morphology, proliferation rate, immunophenotype and karyotype. Despite the chromosomal stability, after additional three passages (P6-P7) hBM-MSCs entered senescence state, confirmed by SA-β-galactosidase staining and paralleling the slower proliferation, altered morphology and imunophenotype. qRT-PCR array profiling revealed 3 out of 86 genes significantly (p <0.05) differentially (≥2 fold) expressed in the late passage cells compared to the early passage cells.
 
Overall design qPCR gene expression profiling. hBM-MSCs from 3 (1 male and 2 females) adult donors (age 30±7.21 years) were used. Each sample was tested in technical duplicate. 6 samples of early passage (P3-P4) hBM-MSCs were grouped to CONTROL group and 6 samples of late passage (P6-P7) hBM-MSCs were grouped to TEST group. The data were analyzed using web-based RT2 Profiler PCR Array Data Analysis v3.5 software (Qiagen)
 
Contributor(s) Kundrotas G, Gasperskaja E, Slapsyte G, Gudleviciene Z, Krasko J, Strumbryte A, Liudkeviciene R
Citation(s) 26910916
Submission date May 15, 2015
Last update date Feb 29, 2016
Contact name Gabrielis Kundrotas
E-mail(s) gabrielis.kundrotas@nvi.lt
Organization name National Cancer Institute
Street address Santariškių str. 1
City Vilnius
ZIP/Postal code LT-08660
Country Lithuania
 
Platforms (1)
GPL20203 SABiosciences/Qiagen Human Mesenchymal Stem Cell RT² Profiler PCR Array
Samples (12)
GSM1686549 hBM-MSC #1 P3 (I)
GSM1686550 hBM-MSC #1 P3 duplicate (I)
GSM1686551 hBM-MSC #2 P4 (I)
This SubSeries is part of SuperSeries:
GSE68933 Identity, proliferation capacity, genomic stability and novel senescence markers of mesenchymal stem cells isolated from low volume of human bone marrow
Relations
BioProject PRJNA284118

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE68926_fold-change.txt.gz 591 b (ftp)(http) TXT
GSE68926_non-normalized_data.txt.gz 2.6 Kb (ftp)(http) TXT
GSE68926_normalized_data.txt.gz 1.0 Kb (ftp)(http) TXT
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap