|
| Status |
Public on May 18, 2016 |
| Title |
Type IV pili promote early biofilm formation by Clostridium difficile |
| Organism |
Clostridioides difficile R20291 |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Transcriptional analysis of Clostridium difficile R20291 in biofilm formation, planktonic state and grown on blood agar
|
| |
|
| Overall design |
RNA sequencing was performed on Clostridium difficile R20291 in three different conditions: Biofilm formation, plantonic state and grown on blood agar plates. Each condtion has 3 replicates.
|
| |
|
| Contributor(s) |
Maldarelli GA, Piepenbrink KH, Scott AJ, Freiberg JA, Song Y, Achermann Y, Ernst RK, Shirtliff ME, Sundberg EJ, Donnenberg MS, von Rosenvinge EC |
| Citation(s) |
27369898 |
| BioProject |
PRJNA283975 |
| |
| Submission date |
May 18, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Sean Daugherty |
| E-mail(s) |
sdaugherty@som.umaryland.edu
|
| Phone |
410-706-8012
|
| Organization name |
University of Maryland School of Medicine
|
| Department |
Institute for Genome Sciences
|
| Street address |
801 W. Baltimore St.
|
| City |
Baltimore |
| State/province |
Maryland |
| ZIP/Postal code |
21201 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL20211 |
Illumina HiSeq 2000 (Peptoclostridium difficile R20291) |
|
| Samples (9)
|
|
| Relations |
| SRA |
SRP063011 |
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