 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Jan 02, 2016 |
| Title |
RNA-seq 1,25(OH)2D3 time course in THP-1 cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
gene expression profiling by RNA-seq in THP-1 cells treated with 1,25(OH)2D3 for 2.5-24 h
|
| |
|
| Overall design |
three independent experiments of 1,25(OH)2D3 time course in THP-1 cells
|
| |
|
| Contributor(s) |
Seuter S, Neme A, Carlberg C |
| Citation(s) |
26715761, 33753848 |
| |
| Submission date |
May 27, 2015 |
| Last update date |
Apr 06, 2021 |
| Contact name |
Carsten Carlberg |
| E-mail(s) |
carsten.carlberg@uef.fi
|
| Organization name |
University of Eastern Finland
|
| Department |
Institute of Biomedicine
|
| Street address |
Yliopistonranta 1D
|
| City |
Kuopio |
| ZIP/Postal code |
70211 |
| Country |
Finland |
| |
|
| Platforms (1) |
| GPL9115 |
Illumina Genome Analyzer II (Homo sapiens) |
|
| Samples (18)
|
| GSM1697099 |
RNA-seq at 4 h 1,25(OH)2D3, replicate A |
| GSM1697100 |
RNA-seq at 24 h EtOH, replicate A |
| GSM1697101 |
RNA-seq at 24 h 1,25(OH)2D3, replicate A |
| GSM1697102 |
RNA-seq at 2.5 h EtOH, replicate B |
| GSM1697103 |
RNA-seq at 2.5 h 1,25(OH)2D3, replicate B |
| GSM1697104 |
RNA-seq at 4 h EtOH, replicate B |
| GSM1697105 |
RNA-seq at 4 h 1,25(OH)2D3, replicate B |
| GSM1697106 |
RNA-seq at 24 h EtOH, replicate B |
| GSM1697107 |
RNA-seq at 24 h 1,25(OH)2D3, replicate B |
| GSM1697108 |
RNA-seq at 2.5 h EtOH, replicate C |
| GSM1697109 |
RNA-seq at 2.5 h 1,25(OH)2D3, replicate C |
| GSM1697110 |
RNA-seq at 4 h EtOH, replicate C |
| GSM1697111 |
RNA-seq at 4 h 1,25(OH)2D3, replicate C |
| GSM1697112 |
RNA-seq at 24 h EtOH, replicate C |
| GSM1697113 |
RNA-seq at 24 h 1,25(OH)2D3, replicate C |
|
| This SubSeries is part of SuperSeries: |
| GSE69303 |
1,25(OH)2D3 time course in THP-1 cells |
|
| Relations |
| BioProject |
PRJNA285092 |
| SRA |
SRP058771 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE69284_RAW.tar |
906.8 Mb |
(http)(custom) |
TAR (of TDF) |
| GSE69284_gene_exp_24h.diff.gz |
822.9 Kb |
(ftp)(http) |
DIFF |
| GSE69284_gene_exp_2_5h.diff.gz |
791.6 Kb |
(ftp)(http) |
DIFF |
| GSE69284_gene_exp_4h.diff.gz |
800.9 Kb |
(ftp)(http) |
DIFF |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
| Processed data are available on Series record |
|
|
|
|
 |
Less...
More...