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Series GSE6949 Query DataSets for GSE6949
Status Public on Oct 16, 2007
Title Examination of the function of NtMYBGR1 and NtDC1B in tobacco BY-2 cells.
Organism Nicotiana tabacum
Experiment type Expression profiling by array
Summary Overexpression lines for each of NtMYBGR1 (Genbank accession No. AB279612) and NtDC1B (Genbank accession No. AB279614) were used to characterize the function of NtMYBGR1 and NtDC1B in tobacco BY-2 cells. We then analyzed the effect of overexpression of these genes on the expression of other genes, using the tobacco microarray. As control sample, tobacco cells transformed with empty vector pMAT137 vector were used. Two control and two transgenic cell lines were analyzed at day 4 after subculture into fresh media.
Keywords: Genetic modification
 
Overall design 1. pMAT vector control, 2. NtMYBGR1 overexpressor, 3. NtDC1B overexpressor.
 
Contributor(s) Shinya T, Gális I, Narisawa T, Sasaki M, Fukuda H, Matsuoka H, Saito M, Matsuoka K
Citation(s) 17761750
Submission date Feb 03, 2007
Last update date Mar 16, 2012
Contact name Ken Matsuoka
E-mail(s) kenmat@psc.riken.go.jp
Phone 81-45-503-9575
Fax 81-45-503-9573
Organization name RIKEN
Department Plant Science Center
Street address 1-7-22 Suehirocho, Tsurumi-ku,
City Yokohama
State/province Kanagawa
ZIP/Postal code 230-0045
Country Japan
 
Platforms (4)
GPL4707 RIKEN 16K tobacco cDNA microarray (Slide1B)
GPL4708 RIKEN 16K tobacco cDNA microarray (Slide2B)
GPL4709 RIKEN 16K tobacco cDNA microarray (Slide3A)
Samples (24)
GSM160131 Tobacco pMAT137 vector control 4 days slide1 rep1
GSM160132 Tobacco pMAT137 vector control 4 days slide1 rep2
GSM160133 Tobacco pMAT137 vector control 4 days slide2 rep1
Relations
BioProject PRJNA99339

Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE6949_RAW.tar 19.5 Mb (http)(custom) TAR (of TXT)

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