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Status |
Public on Feb 26, 2017 |
Title |
Regulation of nucleosome positioning by a CHD Type III chromatin remodeller and its relationship to developmental gene expression in Dictyostelium [RNA-seq] |
Organism |
Dictyostelium discoideum |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
We utilized RNA-seq to profile expression levels in wild type Ax2 cells and a mutants for ChdC a member of a family of ATP-depedent chromatin remodellers in Dictyostelium discoideum. Total RNA was polyA enriched and sequenced at two stages of development: in the growth stage (0H) and loose mound stage of development (10-12H)
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Overall design |
Looking at mRNA levels in Ax2 and chdC- cells
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Contributor(s) |
Platt JL |
Citation(s) |
28330902 |
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Submission date |
Jun 22, 2015 |
Last update date |
Jul 10, 2019 |
Contact name |
James Platt |
Organization name |
University of Oxford
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Street address |
Roosevelt Drive
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City |
Oxfors |
ZIP/Postal code |
OX3 7BN |
Country |
United Kingdom |
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Platforms (1) |
GPL15643 |
Illumina HiSeq 2000 (Dictyostelium discoideum) |
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Samples (8)
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Relations |
BioProject |
PRJNA287712 |
SRA |
SRP059757 |