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GEO accession:
Series GSE70740
Query DataSets for GSE70740
Status
Public on Mar 07, 2018
Title
NCoR/SMRT co-repressors cooperate with c-MYC to create an epigenetic barrier to somatic cell reprogramming
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
29531310
Submission date
Jul 10, 2015
Last update date
May 15, 2019
Contact name
Andrew P Hutchins
E-mail(s)
andrewh@sustech.edu.cn
Organization name
Southern University of Science and Technology
Department
Bioinformatics
Lab
Bioinformatics and Genomics
Street address
1088 Xueyuan Rd
City
Shenzhen
ZIP/Postal code
518055
Country
China
Platforms (1)
GPL13112
Illumina HiSeq 2000 (Mus musculus)
Samples (25)
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GSM1817004
ESC NCoR ChIP-seq
GSM1817005
ESC SMRT ChIP-seq
GSM1817006
ESC Input
GSM1817007
ESC H3K27ac ChIP-seq
GSM1817008
MEF H3K27ac ChIP-seq
GSM1817009
OSKM Day 9 NCoR ChIP-seq
GSM1817010
OSKM Day 9 SMRT ChIP-seq
GSM1817011
OSKM Day 5 FLAG H3K27ac ChIP-seq
GSM1817012
OSKM Day 5 HDAC3-YF H3K27ac ChIP-seq
GSM1817013
OSKM Day 9 FLAG H3K27ac ChIP-seq
GSM1817014
OSKM Day 9 HDAC3-YF H3K27ac ChIP-seq
GSM1817015
OSKM Day 13 FLAG H3K27ac ChIP-seq
GSM1817016
OSKM Day 13 HDAC3-YF H3K27ac ChIP-seq
GSM1817041
shLuc OSKM day5 replicate 1
GSM1817042
shLuc OSKM day5 replicate 2
GSM1817043
shLuc OSKM day9 replicate 1
GSM1817044
shLuc OSKM day9 replicate 2
GSM1817045
shNcor1 OSKM day5 replicate 1
GSM1817046
shNcor1 OSKM day5 replicate 2
GSM1817047
shNcor1 OSKM day9 replicate 1
GSM1817048
shNcor1 OSKM day9 replicate 2
GSM1817049
shNcor2 OSKM day5 replicate 1
GSM1817050
shNcor2 OSKM day5 replicate 2
GSM1817051
shNcor2 OSKM day9 replicate 1
GSM1817052
shNcor2 OSKM day9 replicate 2
This SuperSeries is composed of the following SubSeries:
GSE70736
NCoR/SMRT co-repressors cooperate with c-MYC to create an epigenetic barrier to somatic cell reprogramming [ChIP-Seq]
GSE70738
NCoR/SMRT co-repressors cooperate with c-MYC to create an epigenetic barrier to somatic cell reprogramming [RNA-seq]
Relations
BioProject
PRJNA289459
Download family
Format
SOFT formatted family file(s)
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MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE70740_RAW.tar
1.7 Gb
(http)
(custom)
TAR (of BED, BW)
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