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Series GSE70765 Query DataSets for GSE70765
Status Public on Jul 11, 2015
Title In-vivo Gene Signatures of Mycobacterium tuberculosis In C3HeB/FeJ Mice
Platform organisms Mycobacterium tuberculosis CDC1551; Mycobacterium tuberculosis H37Rv
Sample organism Mycobacterium tuberculosis H37Rv
Experiment type Expression profiling by array
Summary In-vivo Gene Signatures of Mycobacterium tuberculosis In C3HeB/FeJ Mice
 
Overall design In this experiment we have compared Mtb transcriptomics in-vivo, using samples derived from chronically infected C3HeB/FeJ mice, which produce human like caseating lesions, unlike other murine species, to Mtb cultured in-vitro. Similarly, the genome-wide expression of MtbdeldosR, MtbdeldosS and MtbdeldosT mutants is also compared between lungs from C3HeB/FeJ mice and in-vitro culturing.
 
Contributor(s) Kaushal D, Gautam US
Citation(s) 26270051
Submission date Jul 10, 2015
Last update date Oct 19, 2015
Contact name Deepak Kaushal
E-mail(s) dkaushal@tulane.edu
Organization name Tulane National Primate Research Center
Department Bacteriology
Lab Kaushal
Street address 18703 Three Rivers Rd
City Covington
State/province LA
ZIP/Postal code 38105
Country USA
 
Platforms (1)
GPL18320 MYcroarray Mycobacterium tuberculosis str. H37Rv and str. CDC1551 array
Samples (12)
GSM1817681 MtbWTrep1
GSM1817682 MtbWTrep2
GSM1817683 MtbWTrep3
Relations
BioProject PRJNA289506

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE70765_RAW.tar 22.0 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table
Processed data are available on Series record

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