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Series GSE71288 Query DataSets for GSE71288
Status Public on Aug 01, 2015
Title The niche for extramedullar hematopoiesis in the spleen
Organism Mus musculus
Experiment type Expression profiling by array
Summary Adult hematopoietic stem cells (HSCs) reside primarily in bone marrow. However, hematopoietic stresses such as myelofibrosis, anemia, pregnancy, infection or myeloablation can mobilize HSCs to the spleen and induce extramedullary hematopoiesis (EMH). While the bone marrow HSC niche has been studied intensively, the EMH niche has received little attention. Here, we systematically assessed the physiological sources of the key niche factors, SCF and CXCL12, in the mouse spleen after EMH induction by cyclophosphamide plus granulocyte colony-stimulating factor, blood loss, or pregnancy. In each case, Scf was expressed by endothelial cells and Tcf21+ stromal cells, primarily around sinusoids in red pulp, while Cxcl12 was expressed by a subset of Tcf21+ stromal cells. EMH induction markedly expanded the Scf-expressing endothelial cells and stromal cells by inducing proliferation. Most splenic HSCs were adjacent to Tcf21+ stromal cells in red pulp. Conditional deletion of Scf from spleen endothelial cells or Scf or Cxcl12 from Tcf21+ stromal cells severely reduced spleen EMH and reduced blood cell counts without affecting bone marrow hematopoiesis. Endothelial cells and Tcf21+ stromal cells thus create the splenic EMH niche, which is necessary for the physiological response to diverse hematopoietic stresses.
 
Overall design Unfractionated spleen cells (2 replicates) and FACS-sorted VE-cadherein negative Scf-GFP positive cells (3 replicates)
 
Contributor(s) Inra CN
Citation(s) 26570997
Submission date Jul 24, 2015
Last update date Mar 04, 2019
Contact name Bo Zhou
E-mail(s) bo.zhou@utsouthwestern.edu
Organization name University of Texas Southwestern Medical Center
Department Children's Research Institute
Lab Sean Morrison
Street address 5323 Harry Hines Blvd.
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (5)
GSM1831829 Unfractionated spleen cells_1
GSM1831830 Unfractionated spleen cells_2
GSM1831831 VE-Cad neg Scf-GFP pos_1
Relations
BioProject PRJNA290848

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE71288_Processed_data.txt.gz 1.4 Mb (ftp)(http) TXT
GSE71288_RAW.tar 19.6 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file
Processed data are available on Series record

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