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Series GSE71600 Query DataSets for GSE71600
Status Public on Sep 28, 2016
Title miRNA Expression data from synovium in mouse serum transfer arthritis model (STA) model
Organism Mus musculus
Experiment type Other
Summary To find regulated miRNAs during peak inflammation of rheumatoid arthritis (RA), we have collected synovium from mouse STA model at day 0 (Non Arthritic) and day 10 (Peak Inflammation). For miRNA profiling, we used high-throughput BioMark Real-Time PCR system (Fluidigm, South San Francisco, CA)
 
Overall design We analyzed expression of 750 miRNA in Non-arthritic synovium pooled from 3 mice and Arthritic synovium at peak inflammation pooled from 10 mice. Two biological replicates for each time points. Two technical replicates per sample.
 
Contributor(s) Maeda Y, Farina NH, Matzelle M, Fanning PJ, Lian JB, Gravallese1 EM
Citation(s) 27676131
Submission date Jul 31, 2015
Last update date Sep 28, 2016
Contact name yukiko maeda
E-mail(s) yukiko.maeda@umassmed.edu
Phone 508 856 6357
Organization name Umass Medical School
Department Medicine
Lab Gravallese
Street address 364 Plantation Street
City worcester
State/province massachusetts
ZIP/Postal code 01605
Country USA
 
Platforms (1)
GPL20759 BioMark Real-Time PCR system assay panel
Samples (4)
GSM1841107 miRNA expression data from Non-arthritic synovium pooled from 3 mice 1
GSM1841108 miRNA expression data from Non-arthritic synovium pooled from 3 mice 2
GSM1841109 miRNA expression data from Arthritic synovium at peak inflammation pooled from 10 mice 1
This SubSeries is part of SuperSeries:
GSE71601 Gene and miRNA Expression data from synovium in mouse serum transfer arthritis model (STA) model
Relations
BioProject PRJNA291601

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE71600_STA_Syno_miRNA_Raw_0729_2015.xls.gz 48.6 Kb (ftp)(http) XLS
GSE71600_fold_change.txt.gz 5.7 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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