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Series GSE72640 Query DataSets for GSE72640
Status Public on May 16, 2016
Title Genome-wide mapping of MYCN binding in neuroblastoma cells
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To identify the MYCN transcription factor binding sites across the genome, we performed chromatin immunoprecipitation followed by sequencing (ChIP-seq) using anti-MYCN and anti-IgG antibodies on a MYCN-amplified NB cell line, SK-N-BE(2)-C.
 
Overall design Identification of MYCN binding in neuroblastoma cells.
 
Contributor(s) Juan H
Citation(s) 27167114
Submission date Sep 02, 2015
Last update date May 15, 2019
Contact name Chia-Lang Hsu
E-mail(s) chialanghsu@ntuh.gov.tw
Organization name National Taiwan University Hospital
Department Department of Medical Research
Street address No. 7, Zhongshan S. Rd.
City Taipei
ZIP/Postal code 100
Country Taiwan
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (2)
GSM1867061 MYCN_ChIP-seq
GSM1867062 IgG_ChIP-seq
Relations
BioProject PRJNA294529
SRA SRP063098

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE72640_RAW.tar 2.8 Mb (http)(custom) TAR (of BED, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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