|
| Status |
Public on Mar 29, 2016 |
| Title |
Ribosome hibernation factor promotes Staphyloccocal survival and differentially represses translation |
| Organism |
Staphylococcus aureus |
| Experiment type |
Expression profiling by high throughput sequencing
Other
|
| Summary |
We sequenced a total of 16 cDNA libararies derived from fragmented total mRNA and ribosome protected mRNAs from S. aureus hpf mutant (NE838) and its parental strain JE2 grown in tryptic soy broth (TSB) or minimal medium (MM). The data represented 2 independent biological replicates.
|
| |
|
| Overall design |
Examination of the impact of hpf on global S.aureus translatome, mRNA abundance and the ribosome density along the transcripts.
|
| |
|
| Contributor(s) |
Basu A, Yap MF |
| Citation(s) |
30297357, 27001516 |
| |
| Submission date |
Oct 20, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Mee-Ngan F. Yap |
| E-mail(s) |
frances.yap@northwestern.edu
|
| Phone |
312-503-3793
|
| Organization name |
Northwestern University Feinberg School of Medicine
|
| Department |
Microbiology-Immunology
|
| Lab |
Searle 3-430
|
| Street address |
320 E Superior St
|
| City |
Chicago |
| State/province |
IL |
| ZIP/Postal code |
60611 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL17452 |
Illumina HiSeq 2000 (Staphylococcus aureus) |
|
| Samples (16)
|
|
| Relations |
| BioProject |
PRJNA299306 |
| SRA |
SRP065033 |
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