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| Status |
Public on Mar 01, 2016 |
| Title |
RNA-Seq of Saccharomyces cerevisiae cells carrying different YRR1 alleles in response to 4-nitroquinoline-N-oxide (4NQO) and to glycerol as the sole carbon source |
| Organism |
Saccharomyces cerevisiae |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
In this study, we constructed three isogenic strains of S96 yrr1Δ background (its native YRR1 gene was knocked out) carrying three different YRR1 alleles, YRR1_S96, YRR1_YJM789 and YRR1_S96-I775E, respectively. We then conducted RNA deep sequencing (RNA-Seq) on the three strains grown in Yeast Peptone Dextrose medium (YPD), YPD + 4NQO and Yeast Peptone glycerol medium (YPglycerol).
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| Overall design |
RNA-Seq was performed in biological duplicates on S96 cells carrying three different YRR1 alleles grown in YPD, YPD + 4NQO, YPglycerol
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| Contributor(s) |
Rong-Mullins X, Gallagher JE |
| Citation(s) |
29208650 |
| |
| Submission date |
Nov 03, 2015 |
| Last update date |
Feb 13, 2020 |
| Contact name |
Xiaoqing Rong-Mullins |
| Organization name |
West Virginia University
|
| Street address |
53 Campus Dr
|
| City |
Morgantown |
| State/province |
West Virginia |
| ZIP/Postal code |
26505 |
| Country |
USA |
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| Platforms (1) |
| GPL17143 |
Illumina MiSeq (Saccharomyces cerevisiae) |
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| Samples (18)
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| Relations |
| BioProject |
PRJNA301054 |
| SRA |
SRP065738 |
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