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Series GSE74698 Query DataSets for GSE74698
Status Public on Sep 25, 2016
Title Developing a Novel Two-Dimensional Culture System to Enrich Human Prostate Luminal Progenitors That Can Function as a Cell of Origin for Prostate Cancer
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Elucidating the cell of origin of cancer has great significance in stratifying patients into appropriate treatment groups and for developing novel targeted therapies. Early studies demonstrate that only stem-like basal cells in the normal human prostate (NHP) can function as the cell of origin for prostate cancer (PCa). Here, we show that the organoids derived from bulkNHPluminal cells can also be tumorigenically transformed. We further show that the WIT medium, which is used to culture human mammary epithelial progenitor cells, when combined with the ROCK inhibitor, can readily propagate a population of progenitor-like cells from the primary NHP luminal cell isolates. Such functionally defined luminal progenitors can be transformed by distinct sets of genetic perturbations (i.e., AR+AKT/ERG or c-MYC+PTEN knockout) to form tumor glands. Genome-wide RNA-Seq analysis of freshly purified unperturbed human benign prostatic basal and luminal cells and culture-expanded lineage specific stem/progenitor populations reveals that the luminal progenitors possess a distinct gene expression profile that is greatly enriched in advanced, castration-resistant, and metastatic PCa, and it associates with poor patient survival. The ability of the simple two-dimensional culture system reported herein to greatly enrichNHPprogenitor-like cells should facilitate biological and biochemical studies as well as high-throughput screening in these cells and in progenitor-like PCa cells.
 
Overall design Human total RNA profiles of HPCa167N benign prostatic bulk epithelial cells and freshly purified basal and luminal populations cultured primarily in WIT and PrEGM media by deep RNA-seq.
 
Contributor(s) Zhang D, Lin K, Lu Y, Tang DG
Citation(s) 28297567
Submission date Nov 04, 2015
Last update date May 15, 2019
Contact name Dingxiao Zhang
E-mail(s) zdx1980@hnu.edu.cn
Phone +86-15391542415
Organization name Hunan University
Department School of BioMedical Sciences
Lab Zhang lab
Street address Yuelushan
City Changsha
State/province Hunan
ZIP/Postal code 410082
Country China
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (18)
GSM1930419 P_B1
GSM1930420 P_B2
GSM1930421 P_B3
Relations
BioProject PRJNA301175
SRA SRP065815

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Supplementary file Size Download File type/resource
GSE74698_DESeq_counts.txt.gz 2.6 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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